PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3AG016820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | NF-X1 | ||||||||
Protein Properties | Length: 508aa MW: 55253.6 Da PI: 8.2522 | ||||||||
Description | NF-X1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-NF-X1 | 16.3 | 2.2e-05 | 205 | 222 | 3 | 20 |
zf-NF-X1 3 kHkCqklCHeGpCppCpq 20 +H+C lCH+GpCppCp+ TRIDC3AG016820.1 205 EHTCLLLCHPGPCPPCPA 222 7***************95 PP | |||||||
2 | zf-NF-X1 | 22.3 | 2.7e-07 | 364 | 383 | 1 | 19 |
zf-NF-X1 1 CGkHkCqklCHeGpCpp.Cp 19 CG+HkC + CH+GpC++ C+ TRIDC3AG016820.1 364 CGRHKCPERCHRGPCDVtCR 383 *****************9*7 PP | |||||||
3 | zf-NF-X1 | 18.1 | 5.9e-06 | 417 | 434 | 1 | 18 |
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C++ C+ G+CppC TRIDC3AG016820.1 417 CGRHACKRRCCVGDCPPC 434 ****************** PP | |||||||
4 | zf-NF-X1 | 21.6 | 4.5e-07 | 444 | 463 | 1 | 20 |
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+HkC ++CH+G C pCp+ TRIDC3AG016820.1 444 CGNHKCLSPCHRGACSPCPL 463 ******************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 508 aa Download sequence |
MPSSYAAAAA SSSRKPAPFT TATATTRKPA PLTAPAPPPP NPSHVSDSDP SSYSSSGEET 60 DLSACDPATA SVLSTYLSVA GNGADLSKVG IFLNSAARRR SPPCLICLDP IRPSDPVWSC 120 SASCFALLHL PCIQSWAHQS ASAAPSPTWG CPKCRVAYPK SQTPTSYHCF CSKTEDPPAD 180 PWILPHSCGD VCGRRLNSNP DSGCEHTCLL LCHPGPCPPC PAVVPNARCF CGAHREPRRC 240 AHQRYSCKGK CNKRLSCELH RCPVDCHDGP CPPCAVRGNH KCECGETMVE RLCSERVFQC 300 KRECSGMLEC GKHRCERGCH GGKCGECPLR GQRTCPCGKK DYPRLECDVE AATCGSTCEK 360 VLGCGRHKCP ERCHRGPCDV TCRLVIKKSC RCGVLKKELP CHQDLTCERK CQRLRACGRH 420 ACKRRCCVGD CPPCAETCDR RLRCGNHKCL SPCHRGACSP CPLMKTISCF CGKTYFEVEI 480 GSLWDREESE ASQMLKKMQY RSSLQTQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G05660.1 | 1e-145 | NF-X1 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3AG016820.1 |