PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG016550.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 237aa    MW: 25403.3 Da    PI: 8.1239
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG016550.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding482.8e-152973147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r rW +eE+e+++da  ++G + W++I +++  ++t+ q++s+ qky
  TRIDC3AG016550.2 29 RERWCPEEHERFLDALLRFGRD-WRKIEEHVR-TKTAVQIRSHAQKY 73
                      78******************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MAERGGGGEG TSSSPGKKAR KPYTITRPRE RWCPEEHERF LDALLRFGRD WRKIEEHVRT  60
KTAVQIRSHA QKYFLKVQRL GLAAGLPPPQ HPSRRLAMSQ QQISPADGTA VLHGQPQHCP  120
SGAVQGPVGW TYPGQGVLPA SNDMQNLDWA CSSGSSAWVS HGGAGSQTQP AAATHPGGSS  180
FMGAPSFDDT GMDWTGTGST GEASAIADAE DETIPLPLSP GKQVFFASQW PSLFFLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-30MYB_related family protein