PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG016550.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 250aa    MW: 26795.2 Da    PI: 6.5984
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG016550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.42.8e-074301947
                      TTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqky 47
                      +G + W++I +++  ++t+ q++s+ qky
  TRIDC3AG016550.1  4 FGRD-WRKIEEHVR-TKTAVQIRSHAQKY 30
                      5655.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
LLRFGRDWRK IEEHVRTKTA VQIRSHAQKY FLKVQRLGLA AGLPPPQHPS RRLAMSQQQI  60
SPADGTAVLH GQPQHCPSGA VQGPVGWTYP GQGVLPASND MQNLDWACSS GSSAWVSHGG  120
AGSQTQPAAA THPGGSSFMG APSFDDTGMD WTGTGSTGEA SAIADAEDET IPLPLSPDDM  180
HFARVYRFIG DIFDPATPCR IEAHLQKLKD MDGITVKTIL LVLRNLETNL TAPQFEPIVS  240
VPSLNSPSVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.12e-33MYB_related family protein