PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG014440.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 535aa MW: 58134.3 Da PI: 6.7999

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG014440.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	66.3	6.2e-21	121	237	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...............................lkkplWeevskkmrergferspkqCkekwenlnkryk 62 +Wt+ +v++Li+++ + +++ + + +kk++W++vs++m e gf++sp+qC++k+++lnkryk TRIDC3AG014440.1 121 KWTDAMVRLLIAVVYNAGDDGEGVSaggkaaashshgkagasaaahgghgpqaaaqQKKGKWKSVSRAMVENGFKVSPQQCEDKFNDLNKRYK 213 7********999955555553322334555666666777777778888888888********************************* PP trihelix 63 kikegekkr.tsessstcpyfdql 85 ++ + +++ +++++++ +++d + TRIDC3AG014440.1 214 RVVDLLGRGtACKVVENPALLDAM 237 *******559999999999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MERIDGAGLG ARGSAGAMLG MEMHLVHQPQ PQMHAASSFQ QPPEHLHHGN GGGGGFQVQH 60 HQAMPVRQQH PPPPYAAYVA PPSRVVKAHE EEEMGNGVGN GGGVLQQPGA GAAGCPWSRM 120 KWTDAMVRLL IAVVYNAGDD GEGVSAGGKA AASHSHGKAG ASAAAHGGHG PQAAAQQKKG 180 KWKSVSRAMV ENGFKVSPQQ CEDKFNDLNK RYKRVVDLLG RGTACKVVEN PALLDAMGEL 240 TAKAKEEARK LLSSKHLFFR EMCTYHNAPG AAAAASHGTD DGAACFHHPR PVAVPGAANS 300 SAGLQVVAMV NSSTRSEDDS EDDVLSSKEA EEEEEDDDYD LDDVEEKAPG TNRRGSRVDD 360 SNGFHNYGGH KNKRRRGESS AAEAGEEGEE DGNKHARRRP CAMQQLQREL AAAEAGGDQQ 420 QLRQWMQRRA LELEKQKLAY EVREYALEKQ RHKWEQFKAT KEWDMEHERL RIERRRVDGQ 480 RMLLVLKQKE FDLDLAEAYN NYSSSVDHHP GAQTPPPAGF QQQPGSSPST TGHPN

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MERIDGAGLG ARGSAGAMLG MEMHLVHQPQ PQMHAASSFQ QPPEHLHHGN GGGGGFQVQH  60
HQAMPVRQQH PPPPYAAYVA PPSRVVKAHE EEEMGNGVGN GGGVLQQPGA GAAGCPWSRM  120
KWTDAMVRLL IAVVYNAGDD GEGVSAGGKA AASHSHGKAG ASAAAHGGHG PQAAAQQKKG  180
KWKSVSRAMV ENGFKVSPQQ CEDKFNDLNK RYKRVVDLLG RGTACKVVEN PALLDAMGEL  240
TAKAKEEARK LLSSKHLFFR EMCTYHNAPG AAAAASHGTD DGAACFHHPR PVAVPGAANS  300
SAGLQVVAMV NSSTRSEDDS EDDVLSSKEA EEEEEDDDYD LDDVEEKAPG TNRRGSRVDD  360
SNGFHNYGGH KNKRRRGESS AAEAGEEGEE DGNKHARRRP CAMQQLQREL AAAEAGGDQQ  420
QLRQWMQRRA LELEKQKLAY EVREYALEKQ RHKWEQFKAT KEWDMEHERL RIERRRVDGQ  480
RMLLVLKQKE FDLDLAEAYN NYSSSVDHHP GAQTPPPAGF QQQPGSSPST TGHPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	7e-46	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG014440.1