PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG014390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 250aa MW: 26570.7 Da PI: 10.206 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.4 | 5.5e-32 | 173 | 231 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ TRIDC3AG014390.1 173 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLAEDPRMVITTYEGRHVHS 231 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
LAHGQAASTG ATTAGGTATA ITFSFQPSDP PVNGGLSHHH SLLGYSPLVL DHPTTTTSSS 60 TIPTAAPTLH HIHAHAGAIH PARSSPPHPW SCEEADRERQ RGKGAVAGMG INSAAAGGSG 120 GGERSHGSSA AAAGMGVGAV RMKKAAGGGA VKARRKVREP RFCFKTMSDV DVLDDGYKWR 180 KYGQKVVKNT QHPRSYYRCT QDKCRVKKRV ERLAEDPRMV ITTYEGRHVH SPSRDDDDAA 240 RASAEMSFIW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39410.1 | 4e-47 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG014390.1 |