PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG013740.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 210aa MW: 22091 Da PI: 9.4797 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 88.2 | 7e-28 | 10 | 64 | 6 | 59 |
-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 6 nWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+H h+ TRIDC3AG013740.3 10 QWRKYGQKISKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILITTYEGTHSHP 64 7***********************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MRHPHGTFAQ WRKYGQKISK GNPCPRAYYR CTVAPSCPVR KQVQRCADDM SILITTYEGT 60 HSHPLPPAAA AMASTTSAAA SMLLAGSSSS SSHGHHLPFA SAGLLGPTTI STIASCPTVT 120 LDLTAPHSLM QQQYQSPYAA GYESKALPAA WSSGYLAPYA GGLPFYGKSS LPAMGQHFGL 180 GMATTRAEQL YGAAHSSSYL QRTSSGGVVH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 8e-33 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG013740.3 |