PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG013260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 242aa MW: 26005.2 Da PI: 7.0028 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.5 | 9.8e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd+ l d+ +++G+ +W t +++ g++R++k+c++rw++yl TRIDC3AG013260.1 14 RGPWSPEEDDALRDYMQLHGNTgSWITLPNKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.2 | 4.4e-14 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T eEd +++ + qlG++ W++Ia+ + +Rt++++k++w++ TRIDC3AG013260.1 69 GGFTDEEDTIIYSLYSQLGSK-WSLIASQLE-RRTDNDVKNHWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRAPCCDRA AVKRGPWSPE EDDALRDYMQ LHGNTGSWIT LPNKAGLKRC GKSCRLRWLN 60 YLRPDIRHGG FTDEEDTIIY SLYSQLGSKW SLIASQLERR TDNDVKNHWN TKLKKRLAAA 120 AAAFSTCRSP SFMPLPAPAP AHAHPSPLLP LPVPTVKAET YTYDDFLAPT AGLQDPFAAE 180 GSSSASAGST SASAASSGSN WSAVDNAGGF FVDFCAAGAD LAAADQFLGG FYYPLDPTLS 240 LV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 7e-64 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG013260.1 |