PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG013200.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 338aa MW: 37826.1 Da PI: 8.1988 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 67.5 | 3.7e-21 | 6 | 85 | 58 | 128 |
NAM 58 wyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +fF++ +k+y+tg+rk+r+ + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l TRIDC3AG013200.3 6 KHFFHRPSKAYTTGTRKRRKiqtecdvhKGETRWHKTGKTRPVMA-NGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 85 59*****************75666664433778************.999***********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence |
MDGLSKHFFH RPSKAYTTGT RKRRKIQTEC DVHKGETRWH KTGKTRPVMA NGRQKGCKKI 60 LVLYTNFGKH RKPEKTNWVM HQYHLGDLEE EKEGELVVCK IFYQTQPRQC SWSASSDRGG 120 AGGAVAIAAA AAVTVQEQRM RDSGSGSSSS RDHEALSATS YPAGYAMAAA VEMQHLKHSG 180 DHFSFAPFRK SFEEVGIGGD QVTSDQLGRS EHQQHTGQEQ QPHRPDLATT AVPATAFLVS 240 RPTNPISATV PPPLQHTSVV LDHDQFHVPA IFLDHDKFQN MQQQQQHQQK IDRRSAGLEE 300 LVMGCTSTCT KGETSIPHSQ ETEWPYPYWP PDNQDHHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 3e-56 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG013200.3 |