PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG013170.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 224aa    MW: 23643.7 Da    PI: 10.4206
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG013170.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-15117161347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT++E+ +++ + ++lG+g+W+ I+r++ ++Rt+ q+ s+ qky
  TRIDC3AG013170.4 117 PWTEDEHRRFLAGLEKLGKGDWRGISRHFVTTRTPTQVASHAQKY 161
                       8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MARKCSSCGH NGHNSRTCGG HRGVESGGGG GLRLFGVQLQ VGAAPLKKSF SMECLSSTAS  60
AYYAAAAAVG VAASNSSSSV SSSSSLVSVE ESPEKMGHGY LSDGLMGRAQ ERKKGVPWTE  120
DEHRRFLAGL EKLGKGDWRG ISRHFVTTRT PTQVASHAQK YFLRQAGLAQ KKRRSSLFDV  180
VRATPSSSSS LHLHVVEVTT QLTCALSLGA SRPRPDAALP PCLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.18e-45MYB_related family protein