PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG013170.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 417aa MW: 43909.1 Da PI: 11.1683

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG013170.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.6	3.9e-15	190	234	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ +++ + ++lG+g+W+ I+r++ ++Rt+ q+ s+ qky TRIDC3AG013170.2 190 PWTEDEHRRFLAGLEKLGKGDWRGISRHFVTTRTPTQVASHAQKY 234 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
GRCQCVAVVG TGVRSPANRQ SPATPFSPIK PRMLRLPAVH TIVLSRGLRA RGIISFFSIL 60 PSSLVGFTVP SIGMARKCSS CGHNGHNSRT CGGHRGVESG GGGGLRLFGV QLQVGAAPLK 120 KSFSMECLSS TASAYYAAAA AVGVAASNSS SSVSSSSSLV SVEESPEKMG HGYLSDGLMG 180 RAQERKKGVP WTEDEHRRFL AGLEKLGKGD WRGISRHFVT TRTPTQVASH AQKYFLRQAG 240 LAQKKRRSSL FDVVRATPSS SSSLHLHVVE VTTQLTWYGL FQCSLQVEKN GDRGATERRH 300 RLKPDATSSV DAMGLTFPAL SLGASRPRPD AALPPCLTLM PSCSPPSSMI GAPSASRAPK 360 LPPSLGLVAN ANPPRQAPDL ELKISSTAAR KTDQQAGAAA GSSPSPRTPF FGTIRVT

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

GRCQCVAVVG TGVRSPANRQ SPATPFSPIK PRMLRLPAVH TIVLSRGLRA RGIISFFSIL  60
PSSLVGFTVP SIGMARKCSS CGHNGHNSRT CGGHRGVESG GGGGLRLFGV QLQVGAAPLK  120
KSFSMECLSS TASAYYAAAA AVGVAASNSS SSVSSSSSLV SVEESPEKMG HGYLSDGLMG  180
RAQERKKGVP WTEDEHRRFL AGLEKLGKGD WRGISRHFVT TRTPTQVASH AQKYFLRQAG  240
LAQKKRRSSL FDVVRATPSS SSSLHLHVVE VTTQLTWYGL FQCSLQVEKN GDRGATERRH  300
RLKPDATSSV DAMGLTFPAL SLGASRPRPD AALPPCLTLM PSCSPPSSMI GAPSASRAPK  360
LPPSLGLVAN ANPPRQAPDL ELKISSTAAR KTDQQAGAAA GSSPSPRTPF FGTIRVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56840.1	3e-43	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG013170.2