PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG012560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 200aa MW: 22032.1 Da PI: 8.8559 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.8 | 1.2e-10 | 11 | 57 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +ah+e+ErrRR riN + Lr+++P k ++Ka+ L ++v+ +++L TRIDC3AG012560.1 11 KAHSEAERRRRVRINAHLTALRRMIPDT-----KQMDKAALLARVVDQVRQL 57 69*************************9.....67************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
GRTAPEARAL KAHSEAERRR RVRINAHLTA LRRMIPDTKQ MDKAALLARV VDQVRQLKRR 60 ASEAAQQTPA VPPETDEVSV EFCCTGDTDD DDSRLYIKAS VSCDDRPDLV AGFIQALHGL 120 RLRTVRAEVS SLGGRVQHVF TLCKEEEGSA GCAGLNSLKE AVRFALAKVA SSELVCGGSP 180 FQFQSKRQRI LESHYSIMSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 9e-37 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG012560.1 |