PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG011010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 208aa MW: 22015.8 Da PI: 8.4078 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 92.2 | 6.3e-29 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 +C++C+vlr++C ++C+++p++ p++q++++ +++k++G++ +l+ll+a + r+++++sl+yeA+ r+ +PvyG+vg+++++q+ + TRIDC3AG011010.1 4 SCNGCRVLRKGCGEGCTIRPCLewirsPDAQANATVFLAKFYGRAGLLNLLAAEDAALRPALFRSLLYEACGRMVNPVYGSVGLLWSGQWGAC 96 6****************************************************99999*********************************** PP DUF260 89 qlkaelallke 99 q+++e++l ++ TRIDC3AG011010.1 97 QAAVEAVLKGR 107 ****9988765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MRMSCNGCRV LRKGCGEGCT IRPCLEWIRS PDAQANATVF LAKFYGRAGL LNLLAAEDAA 60 LRPALFRSLL YEACGRMVNP VYGSVGLLWS GQWGACQAAV EAVLKGRPIV RVTSDAPLTA 120 CDIRHVAKAD RPAAAADTPL GVSRAGRTGF KRASSSTAKS KSRTSSGAKR DDGLDQAPSH 180 EESAGSHDHG SHVEDDGMAV EQTRGEES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02550.1 | 2e-59 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG011010.1 |