PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3AG006290.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 190aa MW: 21156.1 Da PI: 10.0606 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 95.3 | 4.2e-30 | 11 | 106 | 1 | 87 |
EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k+ tpsdv+k++rlv+pk++ae+h + +++ l +ed +g++W+++++y+++s++yvltkGW++Fv++++L +gD++vF+ TRIDC3AG006290.2 11 FEKAVTPSDVGKLNRLVVPKQHAEKHfplkrtpetTTTTGNGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKDLAAGDSIVFSC 103 89*************************99877766444458999***********************************************96 PP -SS CS B3 85 dgr 87 + TRIDC3AG006290.2 104 SAY 106 543 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 190 aa Download sequence |
PTPSWAREPL FEKAVTPSDV GKLNRLVVPK QHAEKHFPLK RTPETTTTTG NGVLLNFEDG 60 EGKVWRFRYS YWNSSQSYVL TKGWSRFVRE KDLAAGDSIV FSCSAYGQEK QFFIDCKKNT 120 TVDGGKSASP LPVVETVKGE QVRVVRLFGV DIAGVKRVRA AMAEQGPPEL FQRQCVTHGR 180 HSPALGSFVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68840.2 | 1e-53 | RAV family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3AG006290.2 |