PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG003450.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 422aa MW: 48010.6 Da PI: 7.133

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG003450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	69.3	5.5e-22	344	404	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg+nWrK+GqK++++s+f r YYrC++ +Cpv k+++r++ dp +++++Y+ eH+++ TRIDC3AG003450.1 344 SDGFNWRKFGQKTIHDSNFRRDYYRCAHYrshKCPVIKHMQRTDADPLLFQVVYRHEHTCT 404 7************************97788************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
TSGNHGSEIP DLTGISHLFH LRYLKIKADG EIVLPREIRG LEQLETLELG VCPLEVPQDV 60 IHLRRLQHLI IPSGINLPDG IGNMKSVCTL QEFDVGLNSI DNIRGLGELT NLRNLRICYY 120 MDELHDRKTT QRLDVLRCSL EKLCNLRYLH TDSNINRIYA LSSHVSLCLL RRLHMLCMFP 180 MVPKWIGELH NLTDLDLRFE VLEDDIVILA QLQSLNHLKL HVEGTCEAKE KVVICGIGFP 240 ILKHFRLSCI RISQLTFEAG AMPSLEKLEV RLNFLYGGAP MGIEYLLGLK EILVIVGGYG 300 AEGSTTRAAV SALREAIDMR SSRPTADITC VDNSMFFGLL SLSSDGFNWR KFGQKTIHDS 360 NFRRDYYRCA HYRSHKCPVI KHMQRTDADP LLFQVVYRHE HTCTTQSIFP LPQPGNEEIV 420 DR

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

TSGNHGSEIP DLTGISHLFH LRYLKIKADG EIVLPREIRG LEQLETLELG VCPLEVPQDV  60
IHLRRLQHLI IPSGINLPDG IGNMKSVCTL QEFDVGLNSI DNIRGLGELT NLRNLRICYY  120
MDELHDRKTT QRLDVLRCSL EKLCNLRYLH TDSNINRIYA LSSHVSLCLL RRLHMLCMFP  180
MVPKWIGELH NLTDLDLRFE VLEDDIVILA QLQSLNHLKL HVEGTCEAKE KVVICGIGFP  240
ILKHFRLSCI RISQLTFEAG AMPSLEKLEV RLNFLYGGAP MGIEYLLGLK EILVIVGGYG  300
AEGSTTRAAV SALREAIDMR SSRPTADITC VDNSMFFGLL SLSSDGFNWR KFGQKTIHDS  360
NFRRDYYRCA HYRSHKCPVI KHMQRTDADP LLFQVVYRHE HTCTTQSIFP LPQPGNEEIV  420
DR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.2	2e-16	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG003450.1