PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG003030.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 225aa MW: 24742.2 Da PI: 8.9793 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.4 | 2.8e-19 | 83 | 137 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q+ Le++F++++++s+++++ LA++l+L rqV vWFqNrRa+ k TRIDC3AG003030.2 83 RKKLRLTKDQTALLEDHFKEQSTLSHKQKASLARQLSLRPRQVEVWFQNRRARTK 137 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 118.7 | 3.1e-38 | 83 | 171 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+k+q +lLE++F+e+++L++++K++lar+L l+prqv+vWFqnrRARtk+kq+E+d+e Lkr++++l+een+rL++e ++Lr + TRIDC3AG003030.2 83 RKKLRLTKDQTALLEDHFKEQSTLSHKQKASLARQLSLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLMEENRRLHRELQHLR-A 171 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MFMAHEEAGL ALGLSLGSGA GHHHHLLQPK EAAPPEPCLS LRLAGAGTVK REEEERALIY 60 CSAASSAADD LVEGYNSGGG GSRKKLRLTK DQTALLEDHF KEQSTLSHKQ KASLARQLSL 120 RPRQVEVWFQ NRRARTKLKQ TEVDCELLKR CCETLMEENR RLHRELQHLR ALHHHQHHHP 180 AAAFFIPSAA TVASVCPSCS GAPPAHAADR PATKRTFFAT KSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 88 | SRKKLRL |
2 | 132 | 140 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 2e-42 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG003030.2 |