PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG085510.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 202aa MW: 21106.9 Da PI: 11.2711 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.7 | 1.2e-12 | 38 | 81 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT++E+ l++ + +++G+g+W++I+r + Rt+ q+ s+ qky TRIDC2BG085510.2 38 WTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKY 81 *****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
GGSGGKKGGG RVRGGHGGHG PKGSSKSVEH EGRKGILWTE DEHRLFLLGL EKYGKGDWRS 60 ISRNFVISRT PTQVASHAQK YFIRLNSMNR ERRRSSIHDI TSVNGEASAA QGPITGTNGQ 120 AAVPGKSPKQ SPHQPGNLPP GVDAFGTTIG QPVGGPLVSA VGTPVTLPVA APPHMGYAMH 180 APVPGTVVPR APMYLMPPPP SR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 4 | 10 | GGKKGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 2e-62 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG085510.2 |