PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG084520.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 202aa    MW: 22401.9 Da    PI: 10.0539
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG084520.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.56.6e-1867114148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g+WT+eEde+l+  ++++G g+W++ +++ g+ R++k+c++rw +yl
  TRIDC2BG084520.4  67 KGPWTPEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL 114
                       79********************************************97 PP
2Myb_DNA-binding51.13e-16120165148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg+++ +E++ +++++++lG++ W++Ia ++  +Rt++++k++w+++l
  TRIDC2BG084520.4 120 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLS-RRTDNEIKNYWNTHL 165
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MLIFLRLNNA SCHEIVPVSF FPPSLCSTSV ELLCTQLSAP GFRKAAAYYG PTPMGRSLCC  60
DKVGLKKGPW TPEEDEKLLA HIEEHGHGSW RALPSKAGLQ RCGKSCRLRW TNYLRPDIKR  120
GKFSLQEEQT IIQLHALLGN RWSAIATHLS RRTDNEIKNY WNTHLKKRLA KMGIDPVTHK  180
AASGAPVGTA DDVRSAKAAA SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.22e-87MYB family protein