PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG083790.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 392aa MW: 42583.6 Da PI: 9.8855

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG083790.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	53.2	8e-17	68	154	2	72
trihelix 2 WtkqevlaLiearremeerlrrgk................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 Wt +e+l Li+a+r +++r g +++++W++v ++++ g+ rs++qC++kw+nl ++ykk+++ e +r+ TRIDC2BG083790.2 68 WTLHETLILITAKRLDDDRRAGGGaggvamagpsspptprSAEQRWKWVENYCWINGCLRSQNQCNDKWDNLLRDYKKVRDYEARRA 154 ************77777665534566677777777777****************************************99974 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MSASSDPSPS SSSAAAAASA SPLAAYHAHP HHPHPHHLHL STPPHAYPPA APPPSPASAP 60 RDYRKGNWTL HETLILITAK RLDDDRRAGG GAGGVAMAGP SSPPTPRSAE QRWKWVENYC 120 WINGCLRSQN QCNDKWDNLL RDYKKVRDYE ARRASIAAAP SAQPQPQTPL PSYWTMERHD 180 RKERNLPTNL APEVYDALLD VLSRRAARRG GAAIAPAAPA PLALPPPPPP PPPPPSPPKP 240 LLNQQQQQQQ QKQHRLHPQP PPLLQLPAPE EEMTGSSESG SDGLDLGGMS GGVGGNGDEP 300 EAKRRRRAER LGSSVVRSAT VLARTLVACE DRRERRHREV LELEERRLRL EAERNEVRRQ 360 GFAGLVAAVN GLSGAIHALV SDHHGRSGDS SR

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MSASSDPSPS SSSAAAAASA SPLAAYHAHP HHPHPHHLHL STPPHAYPPA APPPSPASAP  60
RDYRKGNWTL HETLILITAK RLDDDRRAGG GAGGVAMAGP SSPPTPRSAE QRWKWVENYC  120
WINGCLRSQN QCNDKWDNLL RDYKKVRDYE ARRASIAAAP SAQPQPQTPL PSYWTMERHD  180
RKERNLPTNL APEVYDALLD VLSRRAARRG GAAIAPAAPA PLALPPPPPP PPPPPSPPKP  240
LLNQQQQQQQ QKQHRLHPQP PPLLQLPAPE EEMTGSSESG SDGLDLGGMS GGVGGNGDEP  300
EAKRRRRAER LGSSVVRSAT VLARTLVACE DRRERRHREV LELEERRLRL EAERNEVRRQ  360
GFAGLVAAVN GLSGAIHALV SDHHGRSGDS SR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31310.1	8e-41	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG083790.2