PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG083680.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 793aa    MW: 88697.2 Da    PI: 6.3948
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG083680.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.94e-2396197199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC2BG083680.9  96 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 184
                       99***********************9*****86555544..8************************************************..8 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC2BG083680.9 185 NEKNQLWLGIRRA 197
                       999999*****97 PP
2Auxin_resp110.51.7e-36222305183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2BG083680.9 222 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 305
                       79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 793 aa     Download sequence    
LVCLPTLGTR VVYFPQGHSE QVAASTNKEV EGHIPNYPNL PPQLICQLHD VTMHADVETD  60
EVYAQMTLQP LNPQEQNDAY LPAEMGIMSK QPTNYFCKTL TASDTSTHGG FSVPRRAAER  120
VFPPLDFTQQ PPAQELIARD IHDVEWKFRH IFRGQPKRHL LTTGWSVFVS AKRLVAGDSV  180
LFIWNEKNQL WLGIRRANRT QTVMPSSVLS SDSMHIGLLA AAAHAASTNS RFTIFYNPRA  240
CPSEFVIPLS KYIKAVFHTR ISVGMRFRML FETEESSVRR YMGTITEVSD ADPVRWASSY  300
WRSVKVGWDE STAGERPPRV SLWEIEPLTT FPMYPSLFPL RVKHPWYSGV AGLQDDSNAL  360
MWLRGVAGDG GYQSMNFQSP GIGSWGQQRL HPSLMSTEHD QYQAVVAAAA AASQSGGYMK  420
QQFLNLQQPM QSPQEHCNLN PLLQQQILQQ ASQQQTVSAD SQNIQTMLNS SAIQHQLQQL  480
QQLQQVHQVQ QAQQAHIDQK QKIQSDQTYH VPTSASLPSP TSLPSHLREK FGFSDPNANS  540
SSFTTSSSSD NMLESNFLQG NSKAVDLSRF NQPVASDQQQ QQQQQQQQAW KQKFMGSQSL  600
SFGGSGLLNS PTSKDGSLES KIGSDVQNQS LFSPQVDSSS LLYNMVPNMT SNVADNNMST  660
IPSGSTYLQS PMYGCLDDSS GIFQNTGEND PTSRTFVKVY KSGSVGRSLD ITRFSNYAEL  720
REELGQMYGI RGQLDDPDRS GWQLVFVDRE NDVLLLGDDP WESFVNSVWY IKILSPEDVH  780
KLGKQGNDPR YLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein