PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG083680.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 403aa    MW: 45419 Da    PI: 8.2897
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG083680.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.41.3e-23124225199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC2BG083680.6 124 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 212
                       99***********************9*****86555544..8************************************************..8 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC2BG083680.6 213 NEKNQLWLGIRRA 225
                       999999*****97 PP
2Auxin_resp111.96.3e-37250333183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2BG083680.6 250 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 333
                       79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
CLLSLLCARA GAEKKNLNSE LWHACAGPLV CLPTLGTRVV YFPQGHSEQV AASTNKEVEG  60
HIPNYPNLPP QLICQLHDVT MHADVETDEV YAQMTLQPLN PQEQNDAYLP AEMGIMSKQP  120
TNYFCKTLTA SDTSTHGGFS VPRRAAERVF PPLDFTQQPP AQELIARDIH DVEWKFRHIF  180
RGQPKRHLLT TGWSVFVSAK RLVAGDSVLF IWNEKNQLWL GIRRANRTQT VMPSSVLSSD  240
SMHIGLLAAA AHAASTNSRF TIFYNPRACP SEFVIPLSKY IKAVFHTRIS VGMRFRMLFE  300
TEESSVRRYM GTITEVSDAD PVRWASSYWR SVKVGWDEST AGERPPRVSL WEIEPLTTFP  360
MYPSLFPLRV KHPWYSGVAG LQDGIQITAL ATLTFINLWF NAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein