PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG083680.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 403aa    MW: 45303.1 Da    PI: 8.0347
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG083680.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.41.3e-23134235199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC2BG083680.4 134 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 222
                       99***********************9*****86555544..8************************************************..8 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC2BG083680.4 223 NEKNQLWLGIRRA 235
                       999999*****97 PP
2Auxin_resp111.96.3e-37260343183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2BG083680.4 260 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 343
                       79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
ACLAFLLPLV CLLSLLCARA GAEKKNLNSE LWHACAGPLV CLPTLGTRVV YFPQGHSEQV  60
AASTNKEVEG HIPNYPNLPP QLICQLHDVT MHADVETDEV YAQMTLQPLN PQEQNDAYLP  120
AEMGIMSKQP TNYFCKTLTA SDTSTHGGFS VPRRAAERVF PPLDFTQQPP AQELIARDIH  180
DVEWKFRHIF RGQPKRHLLT TGWSVFVSAK RLVAGDSVLF IWNEKNQLWL GIRRANRTQT  240
VMPSSVLSSD SMHIGLLAAA AHAASTNSRF TIFYNPRACP SEFVIPLSKY IKAVFHTRIS  300
VGMRFRMLFE TEESSVRRYM GTITEVSDAD PVRWASSYWR SVKVGWDEST AGERPPRVSL  360
WEIEPLTTFP MYPSLFPLRV KHPWYSGVAG LQDGIQITMT AML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein