PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG083680.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 833aa    MW: 92703.6 Da    PI: 6.2866
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG083680.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.84.2e-23136237199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC2BG083680.3 136 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 224
                       99***********************9*****86555544..8************************************************..8 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC2BG083680.3 225 NEKNQLWLGIRRA 237
                       999999*****97 PP
2Auxin_resp110.41.9e-36262345183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2BG083680.3 262 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 345
                       79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 833 aa     Download sequence    
MSSSSGASLG GQPPPPPPAA PPEEEKKNLN SELWHACAGP LVCLPTLGTR VVYFPQGHSE  60
QVAASTNKEV EGHIPNYPNL PPQLICQLHD VTMHADVETD EVYAQMTLQP LNPQEQNDAY  120
LPAEMGIMSK QPTNYFCKTL TASDTSTHGG FSVPRRAAER VFPPLDFTQQ PPAQELIARD  180
IHDVEWKFRH IFRGQPKRHL LTTGWSVFVS AKRLVAGDSV LFIWNEKNQL WLGIRRANRT  240
QTVMPSSVLS SDSMHIGLLA AAAHAASTNS RFTIFYNPRA CPSEFVIPLS KYIKAVFHTR  300
ISVGMRFRML FETEESSVRR YMGTITEVSD ADPVRWASSY WRSVKVGWDE STAGERPPRV  360
SLWEIEPLTT FPMYPSLFPL RVKHPWYSGV AGLQDDSNAL MWLRGVAGDG GYQSMNFQSP  420
GIGSWGQQRL HPSLMSTEHD QYQAVVAAAA AASQSGGYMK QQFLNLQQPM QSPQEHCNLN  480
PLLQQQILQQ ASQQQTVSAD SQNIQTMLNS SAIQHQLQQL QQLQQVHQVQ QAQQAHIDQK  540
QKIQSDQTYH VPTSASLPSP TSLPSHLREK FGFSDPNANS SSFTTSSSSD NMLESNFLQG  600
NSKAVDLSRF NQPVASDQQQ QQQQQQQQAW KQKFMGSQSL SFGGSGLLNS PTSKDGSLES  660
KIGSDVQNQS LFSPQVDSSS LLYNMVPNMT SNVADNNMST IPSGSTYLQS PMYGCLDDSS  720
GIFQNTGEND PTSRTFVKVY KSGSVGRSLD ITRFSNYAEL REELGQMYGI RGQLDDPDRS  780
GWQLVFVDRE NDVLLLGDDP WESFVNSVWY IKILSPEDVH KLGKQGNDPR YLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein