PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG083680.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 837aa    MW: 93173.2 Da    PI: 6.2866
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG083680.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.84.3e-23140241199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC2BG083680.2 140 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 228
                       99***********************9*****86555544..8************************************************..8 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC2BG083680.2 229 NEKNQLWLGIRRA 241
                       999999*****97 PP
2Auxin_resp110.41.9e-36266349183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2BG083680.2 266 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 349
                       79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 837 aa     Download sequence    
MSSSSGASLG GQPPPPPPAA PPEEGLWLEK KNLNSELWHA CAGPLVCLPT LGTRVVYFPQ  60
GHSEQVAAST NKEVEGHIPN YPNLPPQLIC QLHDVTMHAD VETDEVYAQM TLQPLNPQEQ  120
NDAYLPAEMG IMSKQPTNYF CKTLTASDTS THGGFSVPRR AAERVFPPLD FTQQPPAQEL  180
IARDIHDVEW KFRHIFRGQP KRHLLTTGWS VFVSAKRLVA GDSVLFIWNE KNQLWLGIRR  240
ANRTQTVMPS SVLSSDSMHI GLLAAAAHAA STNSRFTIFY NPRACPSEFV IPLSKYIKAV  300
FHTRISVGMR FRMLFETEES SVRRYMGTIT EVSDADPVRW ASSYWRSVKV GWDESTAGER  360
PPRVSLWEIE PLTTFPMYPS LFPLRVKHPW YSGVAGLQDD SNALMWLRGV AGDGGYQSMN  420
FQSPGIGSWG QQRLHPSLMS TEHDQYQAVV AAAAAASQSG GYMKQQFLNL QQPMQSPQEH  480
CNLNPLLQQQ ILQQASQQQT VSADSQNIQT MLNSSAIQHQ LQQLQQLQQV HQVQQAQQAH  540
IDQKQKIQSD QTYHVPTSAS LPSPTSLPSH LREKFGFSDP NANSSSFTTS SSSDNMLESN  600
FLQGNSKAVD LSRFNQPVAS DQQQQQQQQQ QQAWKQKFMG SQSLSFGGSG LLNSPTSKDG  660
SLESKIGSDV QNQSLFSPQV DSSSLLYNMV PNMTSNVADN NMSTIPSGST YLQSPMYGCL  720
DDSSGIFQNT GENDPTSRTF VKVYKSGSVG RSLDITRFSN YAELREELGQ MYGIRGQLDD  780
PDRSGWQLVF VDRENDVLLL GDDPWESFVN SVWYIKILSP EDVHKLGKQG NDPRYLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein