PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG083680.13

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 669aa MW: 75048.7 Da PI: 6.7263

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG083680.13	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.7	3.8e-17	10	73	34	99
SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++l+ +d + +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++++r+ TRIDC2BG083680.13 10 QELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQLWLGIRRA 73 48999*******************************************..8999999***97 PP
2	Auxin_resp	110.8	1.4e-36	98	181	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPra++seFv++++k+ ka+ +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW S Wrs+k TRIDC2BG083680.13 98 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 181 79*****************************986599****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
WDFTQQPPAQ ELIARDIHDV EWKFRHIFRG QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW 60 NEKNQLWLGI RRANRTQTVM PSSVLSSDSM HIGLLAAAAH AASTNSRFTI FYNPRACPSE 120 FVIPLSKYIK AVFHTRISVG MRFRMLFETE ESSVRRYMGT ITEVSDADPV RWASSYWRSV 180 KVGWDESTAG ERPPRVSLWE IEPLTTFPMY PSLFPLRVKH PWYSGVAGLQ DDSNALMWLR 240 GVAGDGGYQS MNFQSPGIGS WGQQRLHPSL MSTEHDQYQA VVAAAAAASQ SGGYMKQQFL 300 NLQQPMQSPQ EHCNLNPLLQ QQILQQASQQ QTVSADSQNI QTMLNSSAIQ HQLQQLQQLQ 360 QVHQVQQAQQ AHIDQKQKIQ SDQTYHVPTS ASLPSPTSLP SHLREKFGFS DPNANSSSFT 420 TSSSSDNMLE SNFLQGNSKA VDLSRFNQPV ASDQQQQQQQ QQQQAWKQKF MGSQSLSFGG 480 SGLLNSPTSK DGSLESKIGS DVQNQSLFSP QVDSSSLLYN MVPNMTSNVA DNNMSTIPSG 540 STYLQSPMYG CLDDSSGIFQ NTGENDPTSR TFVKVYKSGS VGRSLDITRF SNYAELREEL 600 GQMYGIRGQL DDPDRSGWQL VFVDRENDVL LLGDDPWESF VNSVWYIKIL SPEDVHKLGK 660 QGNDPRYLS

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

WDFTQQPPAQ ELIARDIHDV EWKFRHIFRG QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW  60
NEKNQLWLGI RRANRTQTVM PSSVLSSDSM HIGLLAAAAH AASTNSRFTI FYNPRACPSE  120
FVIPLSKYIK AVFHTRISVG MRFRMLFETE ESSVRRYMGT ITEVSDADPV RWASSYWRSV  180
KVGWDESTAG ERPPRVSLWE IEPLTTFPMY PSLFPLRVKH PWYSGVAGLQ DDSNALMWLR  240
GVAGDGGYQS MNFQSPGIGS WGQQRLHPSL MSTEHDQYQA VVAAAAAASQ SGGYMKQQFL  300
NLQQPMQSPQ EHCNLNPLLQ QQILQQASQQ QTVSADSQNI QTMLNSSAIQ HQLQQLQQLQ  360
QVHQVQQAQQ AHIDQKQKIQ SDQTYHVPTS ASLPSPTSLP SHLREKFGFS DPNANSSSFT  420
TSSSSDNMLE SNFLQGNSKA VDLSRFNQPV ASDQQQQQQQ QQQQAWKQKF MGSQSLSFGG  480
SGLLNSPTSK DGSLESKIGS DVQNQSLFSP QVDSSSLLYN MVPNMTSNVA DNNMSTIPSG  540
STYLQSPMYG CLDDSSGIFQ NTGENDPTSR TFVKVYKSGS VGRSLDITRF SNYAELREEL  600
GQMYGIRGQL DDPDRSGWQL VFVDRENDVL LLGDDPWESF VNSVWYIKIL SPEDVHKLGK  660
QGNDPRYLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	1e-141	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG083680.13