PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG083680.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 689aa    MW: 76764 Da    PI: 6.7638
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG083680.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.23.2e-2375176199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   
  TRIDC2BG083680.11  75 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 162
                        99***********************9*****86555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC2BG083680.11 163 WNEKNQLWLGIRRA 176
                        8999999*****97 PP
2Auxin_resp110.71.4e-36201284183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2BG083680.11 201 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 284
                        79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 689 aa     Download sequence    
VAASTNKEVE GHIPNYPNLP PQLICQLHDV TMHADVETDE VYAQMTLQPL NPQEQNDAYL  60
PAEMGIMSKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAERV FPPLDFTQQP PAQELIARDI  120
HDVEWKFRHI FRGQPKRHLL TTGWSVFVSA KRLVAGDSVL FIWNEKNQLW LGIRRANRTQ  180
TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNPRAC PSEFVIPLSK YIKAVFHTRI  240
SVGMRFRMLF ETEESSVRRY MGTITEVSDA DPVRWASSYW RSVKVGWDES TAGERPPRVS  300
LWEIEPLTTF PMYPSLFPLR VKHPWYSGVA GLQDDSNALM WLRGVAGDGG YQSMNFQSPG  360
IGSWGQQRLH PSLMSTEHDQ YQAVVAAAAA ASQSGGYMKQ QFLNLQQPMQ SPQEHCNLNP  420
LLQQQILQQA SQQQTVSADS QNIQTMLNSS AIQHQLQQLQ QLQQVHQVQQ AQQAHIDQKQ  480
KIQSDQTYHV PTSASLPSPT SLPSHLREKF GFSDPNANSS SFTTSSSSDN MLESNFLQGN  540
SKAVDLSRFN QPVASDQQQQ QQQQQQQAWK QKFMGSQSLS FGGSGLLNSP TSKDGSLESK  600
IGSDVQNQSL FSPQVDSSSL LYNMVPNMTS NVADNNMSTI PSGSTYLQSP MYGCLDDSSG  660
IFQNTGENDP TSRTFVKVVV VCCVFLHQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein