PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG078260.9 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 115aa MW: 13352.3 Da PI: 9.7391 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.8 | 2e-11 | 76 | 115 | 1 | 44 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAak 44 s+y+GV+ +k grW+A+ + +k+++lg f+t+eeAa+ TRIDC2BG078260.9 76 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEEEAAR 115 89********.7******5553..2.26**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence |
FDTLVPIKLC SFLISLSFVR GRRAYDRAAI KFRGMEADIN FSLEDYDDIK QMGNLTKEEF 60 VHVLRRQSTG FPRGSSKYRG VTLHKCGRWE ARMGQFLGKK YVYLGLFDTE EEAAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 2e-54 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG078260.9 |