PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG078260.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 252aa MW: 27436.4 Da PI: 6.3082 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 24.7 | 5.8e-08 | 1 | 34 | 17 | 55 |
AP2 17 AeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 A++rd + k+++lg f+ta Aa+a+++a+ k++g TRIDC2BG078260.5 1 AQCRD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 34 89999......55************************998 PP | |||||||
2 | AP2 | 44.4 | 4.1e-14 | 76 | 126 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+eeAa+ +++a+ k +g TRIDC2BG078260.5 76 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEEEAARSYDRAAIKCNG 126 89********.7******5553..2.26**********************99776 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
AQCRDCGKQV YLGGFDTAHA AARAYDRAAI KFRGMEADIN FSLEDYDDIK QMGNLTKEEF 60 VHVLRRQSTG FPRGSSKYRG VTLHKCGRWE ARMGQFLGKK YVYLGLFDTE EEAARSYDRA 120 AIKCNGKDAV TNFDPSTYAE EFEPTASAGD AEQNLDLSLG SSAGSNKRGS LDGGDDDGAA 180 GPDQRVPMAF ELDWQTAAAR STKAKFDQSL THHQMPPPLL QASHMPFSPR HHQFMGNGDP 240 GTAGGPSLTV GA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G36920.1 | 3e-84 | AP2 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG078260.5 |