PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG078260.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 302aa MW: 33379.2 Da PI: 8.905

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG078260.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	29.5	1.8e-09	1	28	4	36
AP2 4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkf 36 +GV++++++grW+++I+d + k+++lgkf TRIDC2BG078260.4 1 RGVTFYRRTGRWESHIWD------CgKQVYLGKF 28 8***************......55*****9 PP
2	AP2	44	5.4e-14	131	181	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+eeAa+ +++a+ k +g TRIDC2BG078260.4 131 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEEEAARSYDRAAIKCNG 181 89******.7**5553..2.26********************99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
RGVTFYRRTG RWESHIWDCG KQVYLGKFPP SPTCPYIRIG RQLAAGRRFS VPSSSHWLCS 60 ARRSRIAGGF DTAHAAARAY DRAAIKFRGM EADINFSLED YDDIKQMGNL TKEEFVHVLR 120 RQSTGFPRGS SKYRGVTLHK CGRWEARMGQ FLGKKYVYLG LFDTEEEAAR SYDRAAIKCN 180 GKDAVTNFDP STYAEEFEPT ASAGDAEQNL DLSLGSSAGS NKRGSLDGGD DDGAAGPDQR 240 VPMAFELDWQ TAAARSTKAK FDQSLTHHQM PPPLLQASHM PFSPRHHQFM GNGDPGTAGG 300 PS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-90	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG078260.4