PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG078210.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 26115.3 Da PI: 10.0928 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 7.1e-17 | 71 | 120 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+WvAeIr+p + r+r++lg++ t+ Aa+a++ a +l+g TRIDC2BG078210.2 71 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYATPVAAARAYDTAVFYLRG 120 7******99.**********732...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MQQGEYRSSS SSEGSAGSAA AAAAAAAAMA PLAAAAAAVV AKEEHNVTVA VAPPIPMAMA 60 MPLQQQQPRK QYRGVRMRKW GKWVAEIREP HKRTRIWLGS YATPVAAARA YDTAVFYLRG 120 RSARLNFPDE ISALALSSPE AAEAGAAGGE MAGELGDGGA LSAASIRKKA IEVGSRVDAL 180 QTGMTTMVAA PTHQRERQRL HHHHHAEPHG EELHRHVKQQ RTAWNGRAKN PDLNQAPSPD 240 TSDAE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23340.1 | 3e-40 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG078210.2 |