PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG076400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 151aa MW: 16618.9 Da PI: 7.9629 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.8 | 1.2e-17 | 6 | 51 | 2 | 50 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaar 50 +y+GVr+++ +g+Wv+eIr+p k++r++lg++ tae+Aa+a+++a+ TRIDC2BG076400.1 6 RYRGVRQRH-WGSWVSEIRHP---LlKKTRIWLGSYETAEDAARAYDEAA 51 69******9.**********8...3456********************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 151 aa Download sequence |
MPKQQRYRGV RQRHWGSWVS EIRHPLLKKT RIWLGSYETA EDAARAYDEA AWLMSGPAAR 60 TNFPSSAPVG GSLSPALRAK VEKCCMPTAK GAEITGAAMA RGYAAHRNKV EEIIKGVDEE 120 EECIEEMIRE LTHYGSVEIV LSSACSSSPA P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25190.1 | 3e-25 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG076400.1 |