PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG076330.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 318aa    MW: 34425.4 Da    PI: 9.1359
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG076330.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP72.29.2e-23178226148
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EE.ETTEEEEE-TTTSS CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvl.vsgleqrfCqqCsr 48 
                       +Cq+egC+adls ak+yhrrhkvCe+hskapvv+ + gl+qrfCqqCsr
  TRIDC2BG076330.2 178 RCQAEGCKADLSGAKRYHRRHKVCEHHSKAPVVVtAGGLHQRFCQQCSR 226
                       6******************************98725689*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MMNLPAAAGN SCDEFGYGAP DPPPPSLFPI MDHQEGGGGI HREHDHHHHH HLGGYSLEPS  60
SLALLPPSSH ATIAAHSPHD ILQFYHHPTS HHYLAAAAAG GNGSPYGQFG GGGSAGGFQS  120
YYHQQVGTGA PEYYFPTLVS SAEENMASFA ATQLGLNLGY RTYFPPRGGY TYGHHPPRCQ  180
AEGCKADLSG AKRYHRRHKV CEHHSKAPVV VTAGGLHQRF CQQCSRGFIC LMSSTTRRRA  240
AGSASPTTTA VEGSQSHRRP MPLTRGGHRP AKQQAPKAKQ PEAAARAPAP ETGWTYKYSW  300
VVETCPKIRT KPWDSARW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.22e-25SBP family protein