PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG074390.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 270aa MW: 27978.5 Da PI: 8.7548 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.5 | 2.3e-08 | 61 | 86 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+ C + Ck+Gd+C+FaHg+ TRIDC2BG074390.6 61 KTRMCTKYNTAEGCKFGDKCHFAHGE 86 89**********************96 PP | |||||||
2 | zf-CCCH | 38.6 | 1.8e-12 | 236 | 261 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ykt++C +f++ GtC +G+rC+FaHg+ TRIDC2BG074390.6 236 YKTKICENFLK-GTCTFGERCHFAHGE 261 9**********.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MISCNFTIMF LTVGCPFGEG CHFAHFVPGG YQAVSKSHSL GHAAVSAASR APADHAASGV 60 KTRMCTKYNT AEGCKFGDKC HFAHGERELG RPPSSYMSQE SSYAPPMGGR YGGRHEPPPP 120 ASMGPPAGNF GASSTCKVSV DAALAGGIIG KGGVNTKQIC RITGVKLSIR DHESNPDLKN 180 IELEGSFDQI KQANDMVRDL IASISASTPS KNPAGTAAPA GRGGGGGGGP GGRSNYKTKI 240 CENFLKGTCT FGERCHFAHG ETEQRKGAAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12130.1 | 8e-51 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG074390.6 |