PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG071610.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 315aa MW: 35696.7 Da PI: 9.5109

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG071610.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.8	1.5e-07	249	282	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + TRIDC2BG071610.9 249 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 282 569*****************************87 PP
2	ELK	29.3	1.9e-10	203	224	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ TRIDC2BG071610.9 203 ELKHELKQGYREKLVDIREEIL 224 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
LAMEVRRLNL RATDDGCRPS PVTDLRPQPW CVWLQAIFFI SSPVPSLVRF MCRAGCCCWR 60 RTSPASASPP PSTSSPASTR RSPRVPPAAA PAGGEELDLF MVLFSLLQTH YVLLLCSFKE 120 QLQQHVRVHA MEAVMACWEL EQTLQSLTGA SPGEGTGATM SDDEDNPVDS ESNMFDGNDV 180 SDGMGFGMLT EGDRSLVERV RQELKHELKQ GYREKLVDIR EEILRKRRAG KLPGDTASTL 240 KAWWQAHAKW PYPTEEDKAR LVQETGLQLK QINNWFINQR KRNWHSNPTS SSSDKSKRKR 300 YGDRDKVKKK KKRLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	300	RKRNWHSNPTSSSSDKSKRKR
2	297	317	RKRNWHSNPTSSSSDKSKRKR
3	298	318	RKRNWHSNPTSSSSDKSKRKR
4	307	314	VKKKKKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-111	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG071610.9