PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG071610.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 280aa MW: 31560.5 Da PI: 8.1428

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG071610.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.1	1.3e-07	221	254	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + TRIDC2BG071610.3 221 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 254 569*****************************87 PP
2	ELK	29.5	1.6e-10	175	196	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ TRIDC2BG071610.3 175 ELKHELKQGYREKLVDIREEIL 196 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
SFQGGEERPD LDPRRVVPAG CCCWRRTSPA SASPPPSTSS PASTRRSPRV PPAAAPAGGE 60 ELDLFMVSCY HHQVLFSLLQ THYVLLLCSF KEQLQQHVRV HAMEAVMACW ELEQTLQSLT 120 GASPGEGTGA TMSDDEDNPV DSESNMFDGN DVSDGMGFGM LTEGDRSLVE RVRQELKHEL 180 KQGYREKLVD IREEILRKRR AGKLPGDTAS TLKAWWQAHA KWPYPTEEDK ARLVQETGLQ 240 LKQINNWFIN QRKRNWHSNP TSSSSDKSKR KRYGDRPKKI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	252	272	RKRNWHSNPTSSSSDKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-110	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG071610.3