PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG070910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 23289.4 Da PI: 10.5841 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.3 | 1.4e-16 | 69 | 119 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr ++ +g+++AeIrd + ng +r++lg+fg++e Aa a+++a+ + +g TRIDC2BG070910.1 69 DFIGVRTRP-WGKFAAEIRDSTRNG--ARVWLGTFGSPEAAAMAYDQAAFSARG 119 688***999.**********44465..**********************99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MSDMDDMTFL GTLLESTGHA SCSGPSLSSS SSCSDMTGMG PGAPHVPAGS SSPKRRGHQA 60 TAAVPIAKDF IGVRTRPWGK FAAEIRDSTR NGARVWLGTF GSPEAAAMAY DQAAFSARGD 120 AAVLNFPVER VRESLRALAL GAVVGSPVLA LKRRHRTRRR SPNKRPVKQQ RRVAAVQEAA 180 LSATTGAVVL EDLGVEYLEE LLRVSEPHMG HLHTTATASS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 7e-40 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG070910.1 |