PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG070520.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 185aa MW: 21367.4 Da PI: 9.4369 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 55.2 | 1.3e-17 | 23 | 68 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRd+iN+++ L+ellP++ +K +K+++L +A++Y+ksLq TRIDC2BG070520.1 23 HNFSERRRRDKINEKLKALQELLPNC-----TKTDKVSMLDEAIDYLKSLQ 68 99************************.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MEDGRALRRM SIPTRRSRSA DFHNFSERRR RDKINEKLKA LQELLPNCTK TDKVSMLDEA 60 IDYLKSLQLQ LQMLVMGKGM APVVPPELQQ YMHYITTDPA AQLMQMPPSE PPRPFQITHA 120 NPPQRESDFL SQMQNHLHPS EPQINFLRPP KLQLYTPEQR GVVGSSSGHN GGWIPERNSS 180 YNFME |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 32 | ERRRRD |
2 | 28 | 33 | RRRRDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 6e-30 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG070520.1 |