PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG070310.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 267aa    MW: 29995.4 Da    PI: 7.4423
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG070310.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B393.31.7e-2936141198
                       EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       f+k ltpsdv+k++rlv+pk++ae++             ++  l++ede g+ W+++++y+ +s++yvltkGW+++vk+++L++gD+v F+++
  TRIDC2BG070310.2  36 FEKSLTPSDVGKLNRLVIPKQHAERYfplngedsP--GDKDLLLSFEDEAGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKQLDAGDIVHFERV 126
                       99***************************977442..33666899**********************************************88 PP

                       SS..SEE..EEEEE- CS
                B3  86 gr..sefelvvkvfr 98 
                       +   ++ +l+++ +r
  TRIDC2BG070310.2 127 RGlgTGDRLFIHCRR 141
                       554455566666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MAMHPLAQGH PQAWPWGVAM YTNIHYHHQY EREHLFEKSL TPSDVGKLNR LVIPKQHAER  60
YFPLNGEDSP GDKDLLLSFE DEAGKPWRFR YSYWTSSQSY VLTKGWSRYV KEKQLDAGDI  120
VHFERVRGLG TGDRLFIHCR RRGESAPPPP VRVPPPALNA GEQQPWSPMC YSTSGSYPTS  180
PANSHAYRRS VEQDHSEMLH AGDSPREADA KSSTASGPPS RRLRLFGVNL DCGPEPEAEA  240
ATPMYGYTHQ SPYAAAVATV PTYWGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06250.24e-57B3 family protein