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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2BG068920.9 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | C3H | ||||||||
| Protein Properties | Length: 53aa MW: 6319.42 Da PI: 6.7637 | ||||||||
| Description | C3H family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-CCCH | 29.3 | 1.4e-09 | 24 | 42 | 8 | 26 |
GGGGTS--TTTTT-SS-SS CS
zf-CCCH 8 ffartGtCkyGdrCkFaHg 26
f+++tG+Ck+ +rCkF+H+
TRIDC2BG068920.9 24 FYMKTGFCKFIERCKFHHP 42
9*****************9 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 53 aa Download sequence |
MAHVLIEPDP MTYPPRPGEI IYDFYMKTGF CKFIERCKFH HPVDWYAPDC IAK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G12680.1 | 5e-12 | C3H family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2BG068920.9 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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