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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2BG068290.2 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | bHLH | ||||||||
| Protein Properties | Length: 340aa MW: 36208.9 Da PI: 6.5172 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 43.4 | 6.3e-14 | 104 | 155 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + + a+i+ A++++k+L+
TRIDC2BG068290.2 104 QRMTHIAVERNRRRQMNEYLAALRSLMPES---YAHRGDQASIVGGAIDFVKELE 155
79****************************...9******************995 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 340 aa Download sequence |
VAPTGSRALA PSSSIRRIGM TLDALCAVSD VLVYDTFNAA AAASAAPADS SLLFGDEAWM 60 AGSASAAAPA VTAVPVEEGE KAQGRRKRRR RARSCKNRED AESQRMTHIA VERNRRRQMN 120 EYLAALRSLM PESYAHRGDQ ASIVGGAIDF VKELEQLLQS LEAQKRTLLA QPEQEHKPLP 180 IRDAMPSSST TVAAAAAATT TSTDEGKQAA ATHDTTGPPF AGFFTYPQYV RLLPPRDDAD 240 DRAGAADIEV TLVETHASVR VMAPRRPGQL LRMVAGMEAL RLTVLHLNVT TLGSLALYSL 300 SVKVEEGCGL TTADDIAAAV HHVLCLVDAE ETSQRLPAGG |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 85 | 91 | RRKRRRR |
| 2 | 86 | 90 | RKRRR |
| 3 | 86 | 93 | RKRRRRAR |
| 4 | 105 | 116 | RMTHIAVERNRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G72210.1 | 8e-60 | bHLH family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2BG068290.2 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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