PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG068290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 298aa MW: 32074.4 Da PI: 7.2749 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.6 | 5.1e-14 | 87 | 138 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + + a+i+ A++++k+L+ TRIDC2BG068290.1 87 QRMTHIAVERNRRRQMNEYLAALRSLMPES---YAHRGDQASIVGGAIDFVKELE 138 79****************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
IGMTLDALCA VSDVLVYDTF NAAAAASAAP ADSSLLFGDE AWMAGSASAA APAVTAVPVE 60 EGEKAQGRRK RRRRARSCKN REDAESQRMT HIAVERNRRR QMNEYLAALR SLMPESYAHR 120 GDQASIVGGA IDFVKELEQL LQSLEAQKRT LLAQPEQEHK PLPIRDAMPS SSTTVAAAAA 180 ATTTSTDEGK QAAATHDTTG PPFAGFFTYP QYVRLLPPRD DADDRAGAAD IEVTLVETHA 240 SVRVMAPRRP GQLLRMVAGM EALRLTVLHL NVTTLGSLAL YSLSVKVHFH AVALNFAP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 68 | 74 | RRKRRRR |
2 | 69 | 73 | RKRRR |
3 | 69 | 76 | RKRRRRAR |
4 | 88 | 99 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 6e-50 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG068290.1 |