PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG068120.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 361aa MW: 39185.4 Da PI: 7.1177

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG068120.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.3e-17	15	64	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ lv+ +k++Gg+ +W+ ++ g++R++k+c++rw +yl TRIDC2BG068120.2 15 KGPWTEEEDKTLVEHIKKHGGKvgSWRGLPKSAGLNRCGKSCRLRWTNYL 64 79**********************************************97 PP
2	Myb_DNA-binding	51.9	1.7e-16	70	114	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T eE+ l++ +++ lG++ W+tIa ++ gRt++++k++w+++ TRIDC2BG068120.2 70 RGNFTDEEERLIITLHAGLGNK-WSTIATHLE-GRTDNEIKNYWNTH 114 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MGRSPCCCRD ADVKKGPWTE EEDKTLVEHI KKHGGKVGSW RGLPKSAGLN RCGKSCRLRW 60 TNYLRPDIKR GNFTDEEERL IITLHAGLGN KWSTIATHLE GRTDNEIKNY WNTHIRKKLL 120 RMGVDPVTHQ QLPPDQSHRH LNATSIAHLP EALLWAAAAA SLSSLDTGAL MQAQLLQQLI 180 PAIGSNYGTS GLIANLAAAN AMQNSSGSMV PDLLLEDQMN CLQPGYLCNT SNFAEQHVVQ 240 EQLTNDTSPG TSSFAAAEQH HVVAPTVSTS DTSRFLSAMW SLALSMDDMT PSLALALALG 300 SRCTTGVALE RLALTPAPDA ANTVPSSPPA EKPPQQGLKP YGMVLSSDLD KSSFRKDLFL 360 D

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MGRSPCCCRD ADVKKGPWTE EEDKTLVEHI KKHGGKVGSW RGLPKSAGLN RCGKSCRLRW  60
TNYLRPDIKR GNFTDEEERL IITLHAGLGN KWSTIATHLE GRTDNEIKNY WNTHIRKKLL  120
RMGVDPVTHQ QLPPDQSHRH LNATSIAHLP EALLWAAAAA SLSSLDTGAL MQAQLLQQLI  180
PAIGSNYGTS GLIANLAAAN AMQNSSGSMV PDLLLEDQMN CLQPGYLCNT SNFAEQHVVQ  240
EQLTNDTSPG TSSFAAAEQH HVVAPTVSTS DTSRFLSAMW SLALSMDDMT PSLALALALG  300
SRCTTGVALE RLALTPAPDA ANTVPSSPPA EKPPQQGLKP YGMVLSSDLD KSSFRKDLFL  360
D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	2e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG068120.2