PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG067940.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 361aa MW: 38741.6 Da PI: 4.7329 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52 | 1.6e-16 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l+ +++++G +W++ ++ g+ R++k+c++rw +yl TRIDC2BG067940.4 16 RGSWTPEEDMRLIAYIQKFGHANWRALPKQAGLLRCGKSCRLRWINYL 63 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 56.1 | 8.7e-18 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e l++++++lG++ W++Ia++++ gRt++++k+ w+++l TRIDC2BG067940.4 69 RGNFTVEEEETLIKLHNMLGNK-WSKIAACLP-GRTDNEIKNVWNTHL 114 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MGKGRAPCCA KVGLNRGSWT PEEDMRLIAY IQKFGHANWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDLKRG NFTVEEEETL IKLHNMLGNK WSKIAACLPG RTDNEIKNVW NTHLKKRVAA 120 SAGEHKKGGA KGKKKTTCVD VPAPAPSPSP SSSTTTTTTT TTNCSSGESG EQSNSSKELE 180 FELDKIEIPM LDLGFDLDML LDTVTNTHCP AIPSAPTSPC SSASPPCVVD DGALLDLPEI 240 DIVPELWSIM DGEGGAGACA ETAQDNAAPC HGKGTEARAA TADDDDGKEW WLEDLEKELG 300 LWGPIEDYQH QQPDPQGCVD PLSASVDDPV SCYFQAGPAR ATSAVQGPEA SAVLANIPMD 360 L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79180.1 | 7e-70 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG067940.4 |