PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG067930.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 363aa MW: 39833.8 Da PI: 4.8762

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG067930.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54	3.7e-17	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l+ +++q+G +W++ ++ g+ R++k+c++rw +yl TRIDC2BG067930.3 16 RGSWTPEEDMRLIAYIQQYGHANWRALPKQAGLLRCGKSCRLRWINYL 63 89****************************99**********97 PP
2	Myb_DNA-binding	56.1	8.8e-18	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e l++++++lG++ W++Ia++++ gRt++++k+ w+++l TRIDC2BG067930.3 69 RGNFTVEEEETLIKLHNMLGNK-WSKIAACLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGKGRAPCCA KVGLNRGSWT PEEDMRLIAY IQQYGHANWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDLKRG NFTVEEEETL IKLHNMLGNK WSKIAACLPG RTDNEIKNVW NTHLKKRVAA 120 SAGEQKKGGA KSKKKTTCVD VPVPSPSPSS STTTTTTTTN CSSGESGEQS NTIKELEFEM 180 DKIEIPMLDL GFDLDMLLNA VPDTHCPAIS SAPTSPCSSA SPPCVVDDQV LLDLPEIDIM 240 PELWSIMDGE GGVGACAETA QAPWSNAALC QGNGTEASAA TANEDDDGKE WWLEDLEKDL 300 GLWGPIEDYQ LQQPDPQGRV DPFSASVDDS ASCYFPAHTR GYHTFIEDRK HNYKSLPEMR 360 TSP

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGKGRAPCCA KVGLNRGSWT PEEDMRLIAY IQQYGHANWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDLKRG NFTVEEEETL IKLHNMLGNK WSKIAACLPG RTDNEIKNVW NTHLKKRVAA  120
SAGEQKKGGA KSKKKTTCVD VPVPSPSPSS STTTTTTTTN CSSGESGEQS NTIKELEFEM  180
DKIEIPMLDL GFDLDMLLNA VPDTHCPAIS SAPTSPCSSA SPPCVVDDQV LLDLPEIDIM  240
PELWSIMDGE GGVGACAETA QAPWSNAALC QGNGTEASAA TANEDDDGKE WWLEDLEKDL  300
GLWGPIEDYQ LQQPDPQGRV DPFSASVDDS ASCYFPAHTR GYHTFIEDRK HNYKSLPEMR  360
TSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	2e-68	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG067930.3