PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG067590.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LFY | ||||||||
Protein Properties | Length: 199aa MW: 21585.2 Da PI: 9.5863 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 254.6 | 4.2e-78 | 27 | 199 | 154 | 321 |
FLO_LFY 154 vqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkse.....ededeeeeededeegsgedgeerqrehPfivtepgev 241 ++e++ a+sgg g+ +a ++a+ kk+++ + +++kk++r+k kel+ + +++ ++++ e+++g g erqrehPf+vtepgev TRIDC2BG067590.3 27 LSNERDGAASGGIGEDDAMRMMASGKKQKNGSAARKAKKARRNKVKELRLDmqgdeHEDGGGGRSESTESSAGGVGGERQREHPFVVTEPGEV 119 33466678888887666666655555544444444455777777777766644332222233455666677888899**************** PP FLO_LFY 242 argkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasna 321 ar+kknGLDYLf+LyeqCr fLlqvq++ak +G+k+Ptkvtnqvfrya k+gasyinkPkmrhYvhCYalhcLde+as+a TRIDC2BG067590.3 120 ARAKKNGLDYLFHLYEQCRLFLLQVQSMAKLHGQKSPTKVTNQVFRYASKVGASYINKPKMRHYVHCYALHCLDEDASDA 199 ******************************************************************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
AASCHQAAAT TDTSPAAPST APHRKVLSNE RDGAASGGIG EDDAMRMMAS GKKQKNGSAA 60 RKAKKARRNK VKELRLDMQG DEHEDGGGGR SESTESSAGG VGGERQREHP FVVTEPGEVA 120 RAKKNGLDYL FHLYEQCRLF LLQVQSMAKL HGQKSPTKVT NQVFRYASKV GASYINKPKM 180 RHYVHCYALH CLDEDASDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61850.1 | 3e-58 | LFY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG067590.3 |