PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG066890.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 383aa MW: 42012.3 Da PI: 7.4969

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG066890.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.6	2.6e-24	114	158	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC2BG066890.5 114 DPEPGRCRRTDGKKWRCSKEAAQDSKYCERHMHRGRNRSRKPVET 158 79****************************************997 PP
2	QLQ	59	1.4e-20	53	88	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FTaaQ ++L++Q+l+yKyL+a++PvPp+Ll++i++ TRIDC2BG066890.5 53 TFTAAQYEELEQQALIYKYLVAGVPVPPDLLLPIRR 88 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
FASLSPAADH HRSSPIFPFC RSSPLYSVGE ETAHQQQQQH TMSGARWAAR PATFTAAQYE 60 ELEQQALIYK YLVAGVPVPP DLLLPIRRGF DSLASRFYHH HAFGYGSYFG KKLDPEPGRC 120 RRTDGKKWRC SKEAAQDSKY CERHMHRGRN RSRKPVETQL VATPHHSHSQ QLQQHAPAAS 180 AAAFHSHSPY PAIATGGGGS FAVGSAQLHM DNAASPYATA GAAGNKDFRY SAYGFRTSAM 240 EEHNQFISAA METAMENYSC RLMPAQNSSF SLASYPMLGT LGDLDQSAIC SLAKTEREPL 300 SFFGGGGGSD DDDSAVKQEN QTLRPFFDEW PKDRDSWPEL QDHDANNSSN AFSATKLSIS 360 IPVTSSDFST TAGSRSPNGI YSR

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

FASLSPAADH HRSSPIFPFC RSSPLYSVGE ETAHQQQQQH TMSGARWAAR PATFTAAQYE  60
ELEQQALIYK YLVAGVPVPP DLLLPIRRGF DSLASRFYHH HAFGYGSYFG KKLDPEPGRC  120
RRTDGKKWRC SKEAAQDSKY CERHMHRGRN RSRKPVETQL VATPHHSHSQ QLQQHAPAAS  180
AAAFHSHSPY PAIATGGGGS FAVGSAQLHM DNAASPYATA GAAGNKDFRY SAYGFRTSAM  240
EEHNQFISAA METAMENYSC RLMPAQNSSF SLASYPMLGT LGDLDQSAIC SLAKTEREPL  300
SFFGGGGGSD DDDSAVKQEN QTLRPFFDEW PKDRDSWPEL QDHDANNSSN AFSATKLSIS  360
IPVTSSDFST TAGSRSPNGI YSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	7e-47	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG066890.5