PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG064320.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 253aa MW: 29301.7 Da PI: 8.0494 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.7 | 1.2e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien++ rqvtfskRr g+lKKA+EL +LCda+v vi+fs +gk+yeyss TRIDC2BG064320.4 9 KKIENTTSRQVTFSKRRMGLLKKANELAILCDAQVGVIVFSGSGKMYEYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 56.3 | 1.4e-19 | 85 | 156 | 14 | 85 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 +++ +e++++k+e + L+ R+++GedL+sL+l++ +Leqq+e sl k+R +K++ll +q+ e++++ TRIDC2BG064320.4 85 QQKIIHEMTRMKDESNRLKIIMRQYMGEDLGSLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMRQRVC 156 678889**************************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MGRGKVELKK IENTTSRQVT FSKRRMGLLK KANELAILCD AQVGVIVFSG SGKMYEYSSP 60 PWRIANIFDR YLKAPSTRFD EMDVQQKIIH EMTRMKDESN RLKIIMRQYM GEDLGSLTLQ 120 DVSNLEQQIE FSLYKVRLRK QQLLDQQLLE MRQRVCETRC IDLSGIPEMH MSEDQSSSYM 180 FHMNPARDQP GQSADVMNPK LFPLWDVGDQ IYGQDAESSM TALKLSPQLQ EYKLQPVQPN 240 LQEGNLHGYV LRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.3 | 3e-41 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG064320.4 |