PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG064320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 240aa MW: 27914.1 Da PI: 8.8605 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.8 | 1.1e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien++ rqvtfskRr g+lKKA+EL +LCda+v vi+fs +gk+yeyss TRIDC2BG064320.1 9 KKIENTTSRQVTFSKRRMGLLKKANELAILCDAQVGVIVFSGSGKMYEYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 59 | 2e-20 | 85 | 162 | 14 | 91 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 +++ +e++++k+e + L+ R+++GedL+sL+l++ +Leqq+e sl k+R +K++ll +q+ e++++e ++e++ TRIDC2BG064320.1 85 QQKIIHEMTRMKDESNRLKIIMRQYMGEDLGSLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMRQREMHMSEDQ 162 678889******************************************************************999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MGRGKVELKK IENTTSRQVT FSKRRMGLLK KANELAILCD AQVGVIVFSG SGKMYEYSSP 60 PWRIANIFDR YLKAPSTRFD EMDVQQKIIH EMTRMKDESN RLKIIMRQYM GEDLGSLTLQ 120 DVSNLEQQIE FSLYKVRLRK QQLLDQQLLE MRQREMHMSE DQSSSYMFHM NPARDQPGQS 180 ADVMNPKLFP LWDVGDQIYG QDAESSMTAL KLSPQLQEYK LQPVQPNLQE GNLHGYVLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.3 | 8e-42 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG064320.1 |