PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG063950.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 894aa MW: 100969 Da PI: 8.5689

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063950.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.4	7.7e-21	181	264	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2BG063950.5 181 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPCPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 264 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 894 aa Download sequence
AGDPAASSPA PSQPQHPTPR ISHIVRTYLD LSSNSKKRRA ARKNQLKPGG VETSAAGENK 60 GCGPSGAASL EHSRLLRELG IRVSRYTNEE RRDIITRYMQ KRSGRQGVNR AAAKVPSRQA 120 LAERRRRSAG GQFLGKEDPQ TADKPEEKAE EEPELPPEVV ANAGGVPIIG MVFESEEKAC 180 KYYVSYAGNV GFSVRKGLWD KTAKSGSRSR FYVCSREGFR AKNLPKRPCP ETRTGCPARF 240 SIMLTPSGKY RVTEFVQDHN HQLAGPIDIG MLKSQRLLSK VQSGNGNAIS IPSRYKNYLR 300 TKSTKDMNAG DFGALTDYFR SMKSDNPSFY YAIQVDENDK AANVFWADAR SIFDYHYFSD 360 VICFDMTYKL NDYSRPLALF LGMNHHRQMV IFGAAFLYDE TAESFKWLLE TFKSAMCGKQ 420 PKTILTDRSA ALKEALDLAW PGTVHRYCLW QIYQDAAKSL AHVFCISEEF THDFSHCVFD 480 VEDGQEFVET WNVIMEKYNL KENKLLNELY EGRENWALPY GRQIFSGDIK SMVRAETLGI 540 RMKEYLGCEK ELSPFLKFFE SSVEKRRQEE IQADYQASQR EPRTPLPLLW QAANLYTPIN 600 FELFRKEYEE CMDCMVYGCG EFGSLSEYMI TVKNRTKEQL VRFDSSDGTV ACTCKKFETA 660 GILCCHILKV YELKNVKEIP PQYLLKRWSK DAKLGTVHEI DGFSFDSHIG SCVPERYAAL 720 CRLFYKIASK AAANVETFSM VASQSDQLNE GIERTLQSTL AAKSSIVHSI KDQLTRMAQN 780 DYPLGNSSEA QKSTGKKMSE VTHRGNCQET NKRQKQRRGH SGEAAAGPRE REVNVTDQFL 840 PDQLMQGHYV LGHNFGISTS QNIRDDLNQF GQASAVPILQ QQPFPGNGPL TETQ

Sequence ? help Back to Top

Protein Sequence Length: 894 aa Download sequence

AGDPAASSPA PSQPQHPTPR ISHIVRTYLD LSSNSKKRRA ARKNQLKPGG VETSAAGENK  60
GCGPSGAASL EHSRLLRELG IRVSRYTNEE RRDIITRYMQ KRSGRQGVNR AAAKVPSRQA  120
LAERRRRSAG GQFLGKEDPQ TADKPEEKAE EEPELPPEVV ANAGGVPIIG MVFESEEKAC  180
KYYVSYAGNV GFSVRKGLWD KTAKSGSRSR FYVCSREGFR AKNLPKRPCP ETRTGCPARF  240
SIMLTPSGKY RVTEFVQDHN HQLAGPIDIG MLKSQRLLSK VQSGNGNAIS IPSRYKNYLR  300
TKSTKDMNAG DFGALTDYFR SMKSDNPSFY YAIQVDENDK AANVFWADAR SIFDYHYFSD  360
VICFDMTYKL NDYSRPLALF LGMNHHRQMV IFGAAFLYDE TAESFKWLLE TFKSAMCGKQ  420
PKTILTDRSA ALKEALDLAW PGTVHRYCLW QIYQDAAKSL AHVFCISEEF THDFSHCVFD  480
VEDGQEFVET WNVIMEKYNL KENKLLNELY EGRENWALPY GRQIFSGDIK SMVRAETLGI  540
RMKEYLGCEK ELSPFLKFFE SSVEKRRQEE IQADYQASQR EPRTPLPLLW QAANLYTPIN  600
FELFRKEYEE CMDCMVYGCG EFGSLSEYMI TVKNRTKEQL VRFDSSDGTV ACTCKKFETA  660
GILCCHILKV YELKNVKEIP PQYLLKRWSK DAKLGTVHEI DGFSFDSHIG SCVPERYAAL  720
CRLFYKIASK AAANVETFSM VASQSDQLNE GIERTLQSTL AAKSSIVHSI KDQLTRMAQN  780
DYPLGNSSEA QKSTGKKMSE VTHRGNCQET NKRQKQRRGH SGEAAAGPRE REVNVTDQFL  840
PDQLMQGHYV LGHNFGISTS QNIRDDLNQF GQASAVPILQ QQPFPGNGPL TETQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063950.5