PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG063950.11 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 716aa MW: 81511.5 Da PI: 7.4148 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 66.8 | 5.7e-21 | 46 | 129 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2BG063950.11 46 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPCPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 129 69********************8888.8999***********98877.....9***********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 716 aa Download sequence |
PRQGGPADKP EEKAEEEPEL PPEVVANAGG VPIIGMVFES EEKACKYYVS YAGNVGFSVR 60 KGLWDKTAKS GSRSRFYVCS REGFRAKNLP KRPCPETRTG CPARFSIMLT PSGKYRVTEF 120 VQDHNHQLAG PIDIGMLKSQ RLLSKVQSGN GNAISIPSRY KNYLRTKSTK DMNAGDFGAL 180 TDYFRSMKSD NPSFYYAIQV DENDKAANVF WADARSIFDY HYFSDVICFD MTYKLNDYSR 240 PLALFLGMNH HRQMVIFGAA FLYDETAESF KWLLETFKSA MCGKQPKTIL TDRSAALKEA 300 LDLAWPGTVH RYCLWQIYQD AAKSLAHVFC ISEEFTHDFS HCVFDVEDGQ EFVETWNVIM 360 EKYNLKENKL LNELYEGREN WALPYGRQIF SGDIKSMVRA ETLGIRMKEY LGCEKELSPF 420 LKFFESSVEK RRQEEIQADY QASQREPRTP LPLLWQAANL YTPINFELFR KEYEECMDCM 480 VYGCGEFGSL SEYMITVKNR TKEQLVRFDS SDGTVACTCK KFETAGILCC HILKVYELKN 540 VKEIPPQYLL KRWSKDAKLG TVHEIDGFSF DSHIGSCVPE RYAALCRLFY KIASKAAANV 600 ETFSMVASQS DQLNEGIERT LQSTLAAKSS IVHSIKDQLT RMAQNDYPLG NSSEAQKSTG 660 KKMSEVTHRG NCQETNKRQK QRRGHSGEAA AGPREREVNV TDQFLPDQLM QVNSST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-107 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG063950.11 |