PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG063080.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 147aa    MW: 15593.7 Da    PI: 9.7646
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG063080.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP69.27.9e-22101147147
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs 47 
                       +CqvegC++ l+ akeyhrrhkvCe+hskap v+v+g eqrfCqqCs
  TRIDC2BG063080.4 101 RCQVEGCHMVLAGAKEYHRRHKVCEAHSKAPRVIVHGAEQRFCQQCS 147
                       6*********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MEGDGNARSR ATLAWDLGVQ WAPAASAAYP QHFLPPPGVA SQQQHMQQEL TSLKLGKRPS  60
NLAGGQVAQM DGSGVGGGRA VVEGKRKEKA AGATATAAMP RCQVEGCHMV LAGAKEYHRR  120
HKVCEAHSKA PRVIVHGAEQ RFCQQCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27370.32e-21SBP family protein